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Metadata

  • README (5.7k MD5: 51152f40061eeab04fabbe18d37c22ac)
  • Cluster Metadata (2.1M MD5: 3f572296ed0d5918b18916b6a9099618)
  • Genome Metadata (92M MD5: a4ba393df92e9d1a35b8b996a69b39fd)
  • Microntology (1.5M MD5: 598454521427c2bf44736e6be3936d56)

    • Genome Taxonomy Database Marker Genes

    Extracted from SPIRE assemblies using HMMs For details see: Hidden but discoverable diversity in the global microbiome
  • PF00380.20
  • PF00410.20
  • PF00466.21
  • PF00687.22
  • PF00827.18
  • PF00900.21
  • PF01000.27
  • PF01015.19
  • PF01025.20
  • PF01090.20
  • PF01200.19
  • PF01280.21
  • PF02576.18
  • PF03726.15
  • PF04919.13
  • PF07541.13
  • TIGR00006
  • TIGR00019
  • TIGR00020
  • TIGR00029
  • TIGR00037
  • TIGR00043
  • TIGR00054
  • TIGR00059
  • TIGR00061
  • TIGR00064
  • TIGR00065
  • TIGR00082
  • TIGR00083
  • TIGR00084
  • TIGR00086
  • TIGR00088
  • TIGR00090
  • TIGR00092
  • TIGR00095
  • TIGR00111
  • TIGR00115
  • TIGR00116
  • TIGR00134
  • TIGR00138
  • TIGR00158
  • TIGR00166
  • TIGR00168
  • TIGR00186
  • TIGR00194
  • TIGR00250
  • TIGR00279
  • TIGR00291
  • TIGR00323
  • TIGR00335
  • TIGR00337
  • TIGR00344
  • TIGR00362
  • TIGR00373
  • TIGR00382
  • TIGR00392
  • TIGR00396
  • TIGR00398
  • TIGR00405
  • TIGR00414
  • TIGR00416
  • TIGR00420
  • TIGR00431
  • TIGR00435
  • TIGR00436
  • TIGR00442
  • TIGR00445
  • TIGR00448
  • TIGR00456
  • TIGR00459
  • TIGR00460
  • TIGR00468
  • TIGR00472
  • TIGR00483
  • TIGR00487
  • TIGR00491
  • TIGR00496
  • TIGR00522
  • TIGR00539
  • TIGR00580
  • TIGR00593
  • TIGR00615
  • TIGR00631
  • TIGR00634
  • TIGR00635
  • TIGR00643
  • TIGR00663
  • TIGR00717
  • TIGR00755
  • TIGR00810
  • TIGR00922
  • TIGR00928
  • TIGR00959
  • TIGR00963
  • TIGR00964
  • TIGR00967
  • TIGR00982
  • TIGR01008
  • TIGR01009
  • TIGR01011
  • TIGR01012
  • TIGR01017
  • TIGR01018
  • TIGR01020
  • TIGR01021
  • TIGR01028
  • TIGR01029
  • TIGR01032
  • TIGR01039
  • TIGR01044
  • TIGR01046
  • TIGR01052
  • TIGR01059
  • TIGR01063
  • TIGR01066
  • TIGR01071
  • TIGR01079
  • TIGR01082
  • TIGR01087
  • TIGR01128
  • TIGR01146
  • TIGR01164
  • TIGR01169
  • TIGR01171
  • TIGR01213
  • TIGR01302
  • TIGR01391
  • TIGR01393
  • TIGR01394
  • TIGR01510
  • TIGR01632
  • TIGR01951
  • TIGR01952
  • TIGR01953
  • TIGR02012
  • TIGR02013
  • TIGR02027
  • TIGR02075
  • TIGR02191
  • TIGR02236
  • TIGR02273
  • TIGR02338
  • TIGR02350
  • TIGR02386
  • TIGR02389
  • TIGR02390
  • TIGR02397
  • TIGR02432
  • TIGR02729
  • TIGR03263
  • TIGR03594
  • TIGR03625
  • TIGR03626
  • TIGR03627
  • TIGR03628
  • TIGR03629
  • TIGR03632
  • TIGR03654
  • TIGR03670
  • TIGR03671
  • TIGR03672
  • TIGR03673
  • TIGR03674
  • TIGR03676
  • TIGR03680
  • TIGR03723
  • TIGR03725
  • TIGR03953

    • SPIRE mOTUs reference database

  • Spire mOTUs DB (7.4G MD5: 800c96b617fb427f1c03f13f9d562e9b)

    • SPIRE representative genomes

    This tar archive contains a representative genome for every cluster in SPIRE. 92,134 genomes are MAGs, The remainder (14,944) are taken from the representative of a linked Progenomes cluster. (Where spire clusters were able to be linked to progenomes clusters the representative from progenomes was taken.)

  • Spire Representative Genomes (81G MD5: 2874ba985a1617b82ea7965276c52e05)
  • Mapping of Cluster to Representative Genome (704K MD5: 8c39da54e86598e2a23ca5a4a2a50515)