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Genome Taxonomy Database Marker Genes

Extracted from SPIRE assemblies using HMMs For details see: Hidden but discoverable diversity in the global microbiome

SPIRE mOTUs reference database

SPIRE representative genomes

This tar archive contains a representative genome for every cluster in SPIRE. 92,134 genomes are MAGs, The remainder (14,944) are taken from the representative of a linked Progenomes cluster. (Where spire clusters were able to be linked to progenomes clusters the representative from progenomes was taken.)