SAMN07336905

ENA Accession: SAMN07336905
Study: Fukuyama_2017_bowelcleansing
Collection Date: 2014-08-07
Location: 37.44, -122.14
SPIRE Cluster Count: 9
SPIRE Genome Count: 19
adult human host mammalian host animal host host-associated intestine digestive tract urban industrialized

  MAGs

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Assembly & Genes
   Assembly megahit/1.2.9
Annotations
   EggNOG Annotation eggnog-mapper/2.1.3
   tRNA Sequences trnascan/2.0.9
   CRISPR Sequences minced/0.4.2
   Antibiotic Resistance Annotations deepARG/1.0
   Antibiotic Resistance Annotations abricate/1.0.1 (megares)
   Antibiotic Resistance Annotations abricate/1.0.1 (vfdb)
Ribosomal RNA
   Bacteria rRNA barrnap/0.9
   Archaea rRNA barrnap/0.9
   Eukaryote rRNA barrnap/0.9
   Mitochondria rRNA barrnap/0.9
Other
   Contig Depth jgi_summarize_bam_contig_depths

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