SAMD00114902

ENA Accession: SAMD00114902
Study: Yachida_2019_CRC
Collection Date: 2014-01-01
Location: 35.66, 139.8
SPIRE Cluster Count: 8
SPIRE Genome Count: 38
elderly human host mammalian host animal host host-associated intestine digestive tract industrialized

  MAGs

  Download Table Data

  Sample Downloads

Assembly & Genes
   Assembly megahit/1.2.9
Annotations
   EggNOG Annotation eggnog-mapper/2.1.3
   tRNA Sequences trnascan/2.0.9
   CRISPR Sequences minced/0.4.2
   Antibiotic Resistance Annotations deepARG/1.0
   Antibiotic Resistance Annotations abricate/1.0.1 (megares)
   Antibiotic Resistance Annotations abricate/1.0.1 (vfdb)
Ribosomal RNA
   Bacteria rRNA barrnap/0.9
   Archaea rRNA barrnap/0.9
   Eukaryote rRNA barrnap/0.9
   Mitochondria rRNA barrnap/0.9
Other
   Contig Depth jgi_summarize_bam_contig_depths

Spotted an error? Report it on GitHub