SPIRE
About
FAQs
Downloads
Contribute
Search
Bittinger_2020_infants
Bacterial colonization reprograms the neonatal gut metabolome.
191
Samples
152
SPIRE Clusters
538
SPIRE Genomes
Accessions:
PRJNA557731
intestine
human host
host-associated
industrialized
animal host
infant
urban
negative control
full term birth
anthropogenic
mammalian host
digestive tract
View in MetaMaps
Sequencing
Total Sequencing (bp):
137,096,435,512
Average depth per sample (bp):
717,782,385
Average read length:
101
Instrument Model:
Seq Mode:
Study Downloads
Assemblies
(1.1G MD5: 1947d473fd923f1e504ce8ef3607f085)
MAGs
(656M MD5: 21011273da1dce09e64951de6c1865d9)
Genecalls (FNA)
(1.2G MD5: 13f9cea3333a6efeb203d236992b6db9)
Proteins (FAA)
(778M MD5: 8600d4b6d3f508bdfce1ad8f1a4eeaa7)
mOTUs3 Profile
SPIRE mOTUs Profile
Samples
191 samples
Download Table Data
Spotted an error?
Report it on GitHub