Duan_2020_CDI_ICU

Gut Microbiota Composition Associated With Clostridium difficile-Positive Diarrhea and C. difficile Type in ICU Patients.
14
Samples
135
SPIRE Clusters
242
SPIRE Genomes
Accessions: PRJNA591064
intestine human host host-associated industrialized animal host elderly adult mammalian host digestive tract
View in MetaMaps

  Sequencing

Total Sequencing (bp): 50,448,706,148
Average depth per sample (bp): 3,603,479,011
Average read length: 125
Instrument Model:
Seq Mode:

  Study Downloads

   Assemblies (555M  MD5: ab32090dfa3844ba358250ac531c5854)
   MAGs (330M  MD5: d3f4e5e8a19e89fc8ed09f638d62c9dd)
   Genecalls (FNA) (592M  MD5: 54af1080d1b2885f8a724d44af01a80b)
   Proteins (FAA) (400M  MD5: b3fb3480205d5c5e82d32fdd701e3485)
   mOTUs3 Profile
   SPIRE mOTUs Profile

  Samples 14 samples

  Download Table Data

Spotted an error? Report it on GitHub