SPIRE
About
FAQs
Downloads
Contribute
Search
Gilroy_2020_chicken
A Genomic Census of the Chicken Gut Microbiome using Metagenomics and Culture
50
Samples
215
SPIRE Clusters
646
SPIRE Genomes
Accessions:
PRJNA543206
intestine
host-associated
animal host
digestive tract
View in MetaMaps
Sequencing
Total Sequencing (bp):
213,832,314,898
Average depth per sample (bp):
4,276,646,298
Average read length:
119
Instrument Model:
Seq Mode:
Study Downloads
Assemblies
(3.4G MD5: 260eafa4ec4fdd497e4eae1e4da43b33)
MAGs
(898M MD5: 3423dfce6c80dc52b23f35469b35efaf)
Genecalls (FNA)
(3.3G MD5: 9823cb3b036c058afb5d8d98907b3e09)
Proteins (FAA)
(2.2G MD5: 3584ac9a35824d16d152d3aaf1660a49)
mOTUs3 Profile
SPIRE mOTUs Profile
Samples
50 samples
Download Table Data
Spotted an error?
Report it on GitHub