SPIRE
About
FAQs
Downloads
Contribute
Search
Hale_2018_CRC
Synthesis of multi-omic data and community metabolic models reveals insights into the role of hydrogen sulfide in colon cancer.
22
Samples
552
SPIRE Clusters
1,205
SPIRE Genomes
Accessions:
PRJNA397219
intestine
human host
host-associated
industrialized
animal host
elderly
adult
mammalian host
digestive tract
View in MetaMaps
Sequencing
Total Sequencing (bp):
1,170,576,081,331
Average depth per sample (bp):
53,208,003,697
Average read length:
153
Instrument Model:
Seq Mode:
Study Downloads
Assemblies
(5.8G MD5: 392eb5dfb7ee2d7e82028ae4aa1ecf3c)
MAGs
(1.5G MD5: c1fcc4435a2cde06fdac7507baaa70d3)
Genecalls (FNA)
(6.0G MD5: 0f25bdba6eb851c38bd3f4665990db78)
Proteins (FAA)
(4.1G MD5: cfd195cdc61d9db259137d5abc711f63)
mOTUs3 Profile
SPIRE mOTUs Profile
Samples
22 samples
Download Table Data
Spotted an error?
Report it on GitHub