SPIRE

JGI_microbialmat_USA_Mexico

Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate.

84

Samples

367

SPIRE Clusters

716

SPIRE Genomes

Accessions: PRJNA336637 PRJNA336644 PRJNA336650

PRJNA336653 PRJNA336655 PRJNA336658 PRJNA336659 PRJNA336661 PRJNA336698 PRJNA336702 PRJNA337838 PRJNA365744 PRJNA365745 PRJNA365746 PRJNA365747 PRJNA365748 PRJNA365749 PRJNA365750 PRJNA365751 PRJNA366310 PRJNA366311 PRJNA366312 PRJNA366313 PRJNA366314 PRJNA366315 PRJNA366317 PRJNA366378 PRJNA366469 PRJNA366493 PRJNA366663 PRJNA366664 PRJNA366684 PRJNA367003 PRJNA367004 PRJNA367005 PRJNA367006 PRJNA367007 PRJNA367008 PRJNA441713 PRJNA441714 PRJNA441715 PRJNA441716 PRJNA441717 PRJNA441718 PRJNA441719 PRJNA442755 PRJNA442756 PRJNA442757 PRJNA442758 PRJNA442759 PRJNA442768 PRJNA442769 PRJNA442770 PRJNA442771 PRJNA442772 PRJNA442773 PRJNA442774 PRJNA442775 PRJNA442776 PRJNA442777 PRJNA442778 PRJNA442779 PRJNA442780 PRJNA442781 PRJNA442782 PRJNA442783 PRJNA442784 PRJNA442785 PRJNA442786 PRJNA442801 PRJNA442802 PRJNA442803 PRJNA442804 PRJNA442805 PRJNA442806 PRJNA442807 PRJNA442808 PRJNA442809 PRJNA442810 PRJNA442811 PRJNA442812 PRJNA442813 PRJNA442814 PRJNA442815

very high salinity lotic littoral fresh water spring lentic alkaline briny water hot spring low salinity aquatic marine

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Sequencing

Total Sequencing (bp):	509,449,909,486
Average depth per sample (bp):	6,064,879,875
Average read length:	106
Instrument Model:
Seq Mode:

Study Downloads

Assemblies (2.1G MD5: 4bc52a18ff4c0bc0271ac6d3aea57b3e)

MAGs (732M MD5: 0182c497b56e0fa98f45f7ff7dc24b5d)

Genecalls (FNA) (2.2G MD5: f653bd0f91efd76622175fbc7ed20c84)

Proteins (FAA) (1.5G MD5: eb4f1c435dc1f6f7c89c48c1788ec033)

mOTUs3 Profile

SPIRE mOTUs Profile

Samples 84 samples

Download Table Data