Kim_2020_CDI

Quantitative characterization of Clostridioides difficile population in the gut microbiome of patients with C. difficile infection and their association with clinical factors.
87
Samples
572
SPIRE Clusters
2,510
SPIRE Genomes
Accessions: PRJEB33013 PRJEB35738
intestine human host host-associated animal host adult mammalian host digestive tract
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  Sequencing

Total Sequencing (bp): 387,362,424,409
Average depth per sample (bp): 4,452,441,660
Average read length: 118
Instrument Model:
Seq Mode:

  Study Downloads

   Assemblies (5.8G  MD5: 5de90ac37db40d40bb02659ccd09ad84)
   MAGs (3.0G  MD5: 23ba68ceec65772937ddd9ca003c6d52)
   Genecalls (FNA) (6.1G  MD5: 6fdf22eed47c1464237510aca92e1ece)
   Proteins (FAA) (4.2G  MD5: 674c82f724b97f9e867ff8d3fb266b4a)
   mOTUs3 Profile
   SPIRE mOTUs Profile

  Samples 87 samples

  Download Table Data

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