SPIRE
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Li_2018_vagina
The metagenome of the female upper reproductive tract.
76
Samples
12
SPIRE Clusters
32
SPIRE Genomes
Accessions:
PRJEB24147
urogenital tract
human host
host-associated
industrialized
animal host
urban
adult
mammalian host
View in MetaMaps
Sequencing
Total Sequencing (bp):
14,458,129,451
Average depth per sample (bp):
190,238,545
Average read length:
81
Instrument Model:
Seq Mode:
Study Downloads
Assemblies
(53M MD5: b4ac1b5e1fa5e074eff0c3fa297d72dd)
MAGs
(21M MD5: bcbf7bb1d50e56791d9aaec4c2095b6e)
Genecalls (FNA)
(45M MD5: 534fe708ca564a92a9a67527c11e7431)
Proteins (FAA)
(31M MD5: 48cab3535638a36f9443a152038e5fd2)
mOTUs3 Profile
SPIRE mOTUs Profile
Samples
76 samples
Download Table Data
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