Lokmer_2019_gut_protozoa

Use of shotgun metagenomics for the identification of protozoa in the gut microbiota of healthy individuals from worldwide populations with various industrialization levels.
57
Samples
333
SPIRE Clusters
943
SPIRE Genomes
Accessions: PRJEB27005
hunter-gatherer non-industrialized intestine rural human host host-associated traditional agriculturalist animal host elderly adult mammalian host digestive tract
View in MetaMaps

  Sequencing

Total Sequencing (bp): 195,835,147,300
Average depth per sample (bp): 3,435,704,339
Average read length: 88
Instrument Model:
Seq Mode:

  Study Downloads

   Assemblies (3.0G  MD5: adab04bdf29e55b373734674545351ec)
   MAGs (1.1G  MD5: fde967381b5ff31d4354c162b14050d8)
   Genecalls (FNA) (3.2G  MD5: 5023dcc63ae72f4f3c878fb4fb6b3d82)
   Proteins (FAA) (2.2G  MD5: 2af0c31226385e3b2fe666ef182ccc9d)
   mOTUs3 Profile
   SPIRE mOTUs Profile

  Samples 57 samples

  Download Table Data

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