SPIRE
About
FAQs
Downloads
Contribute
Search
MoralesCruz_2017_vine
Closed-reference metatranscriptomics enables in planta profiling of putative virulence activities in the grapevine trunk disease complex.
28
Samples
22
SPIRE Clusters
27
SPIRE Genomes
Accessions:
PRJNA352065
phyllosphere
terrestrial
host-associated
agriculture
anthropogenic
plant host
View in MetaMaps
Sequencing
Total Sequencing (bp):
140,127,406,019
Average depth per sample (bp):
5,004,550,215
Average read length:
112
Instrument Model:
Seq Mode:
Study Downloads
Assemblies
(3.2G MD5: 58aec1a84c582514fbee268707b441b5)
MAGs
(1.6G MD5: 2113b31b5bffcbdeac0b6fc7f67a65b6)
Genecalls (FNA)
(1.3G MD5: 6aacdcc96da07acc62d5d7d4595704f4)
Proteins (FAA)
(912M MD5: 5c7de4575ef2a19997024a75337e4e79)
mOTUs3 Profile
SPIRE mOTUs Profile
Samples
28 samples
Download Table Data
Spotted an error?
Report it on GitHub