Podlesny_2020_FMT_RCDI

Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation.
27
Samples
236
SPIRE Clusters
462
SPIRE Genomes
Accessions: PRJEB39023
intestine human host host-associated industrialized animal host elderly adult mammalian host digestive tract
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  Sequencing

Total Sequencing (bp): 158,174,037,273
Average depth per sample (bp): 5,858,297,677
Average read length: 112
Instrument Model:
Seq Mode:

  Study Downloads

   Assemblies (1.1G  MD5: d5ebaf65c1e4e52e0987662e5b1cb9ae)
   MAGs (568M  MD5: 90de62294e5bd5e1a7c0174b635bd01c)
   Genecalls (FNA) (1.2G  MD5: 25107a7f722e0b32405342cca7cd6b13)
   Proteins (FAA) (772M  MD5: 7020e8aad0d53ab3fc2cacfdc6e69758)
   mOTUs3 Profile
   SPIRE mOTUs Profile

  Samples 27 samples

  Download Table Data

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