Riiser_2019_cod

Switching on the light: using metagenomic shotgun sequencing to characterize the intestinal microbiome of Atlantic cod.
57
Samples
15
SPIRE Clusters
80
SPIRE Genomes
Accessions: PRJEB29346
intestine child host-associated animal host aquatic digestive tract marine
View in MetaMaps

  Sequencing

Total Sequencing (bp): 41,043,622,839
Average depth per sample (bp): 720,063,559
Average read length: 114
Instrument Model:
Seq Mode:

  Study Downloads

   Assemblies (706M  MD5: ffc4a9296fadaacb048ec31e00c422fd)
   MAGs (117M  MD5: 738801dd709f4379644c2324909e4c3d)
   Genecalls (FNA) (481M  MD5: 18ac70a0396154390e7e1b7e34fc953f)
   Proteins (FAA) (332M  MD5: 7959fba1334b60b674b1d38c29d44f8f)
   mOTUs3 Profile
   SPIRE mOTUs Profile

  Samples 57 samples

  Download Table Data

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