Rocafort_2019_HIV

Evolution of the gut microbiome following acute HIV-1 infection.
54
Samples
181
SPIRE Clusters
489
SPIRE Genomes
Accessions: PRJNA450025
intestine rural human host host-associated animal host adult mammalian host digestive tract adolescent
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  Sequencing

Total Sequencing (bp): 59,652,373,556
Average depth per sample (bp): 1,104,673,584
Average read length: 103
Instrument Model:
Seq Mode:

  Study Downloads

   Assemblies (1.4G  MD5: 6089eba6bd56431844674c612797a45f)
   MAGs (599M  MD5: 4084aee9359b5c5a63eea8e183fd1cb7)
   Genecalls (FNA) (1.5G  MD5: 8aa8bb0cfccbd293791e5f4f8eb10b0d)
   Proteins (FAA) (012M  MD5: 9ad3530a5c78176196d1defd9ad4f20f)
   mOTUs3 Profile
   SPIRE mOTUs Profile

  Samples 54 samples

  Download Table Data

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