SPIRE
About
FAQs
Downloads
Contribute
Search
Rosa_2018_Indonesia_Liberia
Differential human gut microbiome assemblages during soil-transmitted helminth infections in Indonesia and Liberia.
24
Samples
376
SPIRE Clusters
1,003
SPIRE Genomes
Accessions:
PRJNA407815
non-industrialized
intestine
rural
child
human host
host-associated
animal host
adult
mammalian host
digestive tract
adolescent
View in MetaMaps
Sequencing
Total Sequencing (bp):
282,304,463,211
Average depth per sample (bp):
11,762,685,967
Average read length:
91
Instrument Model:
Seq Mode:
Study Downloads
Assemblies
(2.6G MD5: b11d450b536bdf8069cb277c2660909f)
MAGs
(1.1G MD5: e556f95220e18c09aeea7e7ac08f145f)
Genecalls (FNA)
(2.7G MD5: 4e4ec50fb2317414a28da6f5b8bf0635)
Proteins (FAA)
(1.8G MD5: 9a1dc33cec9420ef80cc269b1b8b0b7d)
mOTUs3 Profile
SPIRE mOTUs Profile
Samples
24 samples
Download Table Data
Spotted an error?
Report it on GitHub