Stewart_2019_cdifficile

Integrated Meta-omics Reveals a Fungus-Associated Bacteriome and Distinct Functional Pathways in Clostridioides difficile Infection.
26
Samples
32
SPIRE Clusters
41
SPIRE Genomes
Accessions: PRJNA478949
intestine human host host-associated industrialized animal host elderly adult mammalian host digestive tract
View in MetaMaps

  Sequencing

Total Sequencing (bp): 40,335,075,998
Average depth per sample (bp): 1,551,349,077
Average read length: 121
Instrument Model:
Seq Mode:

  Study Downloads

   Assemblies (264M  MD5: 4b85944e8d881f8d02f43dc094ce78ff)
   MAGs (70M  MD5: f1e46ed5c04e4a781bd82837bca2391a)
   Genecalls (FNA) (284M  MD5: 397a5a37508f8567fb80f2bfef6aaaf6)
   Proteins (FAA) (192M  MD5: 6120a27ab901a08ee0e43bbdadd96cd2)
   mOTUs3 Profile
   SPIRE mOTUs Profile

  Samples 26 samples

  Download Table Data

Spotted an error? Report it on GitHub