Tamburini_2022_South_Africa

Short- and long-read metagenomics of urban and rural South African gut microbiomes reveal a transitional composition and undescribed taxa.
168
Samples
410
SPIRE Clusters
1,708
SPIRE Genomes
Accessions: PRJNA678454
intestine rural human host host-associated industrialized animal host urban mammalian host digestive tract
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  Sequencing

Total Sequencing (bp): 210,347,572,105
Average depth per sample (bp): 1,267,154,049
Average read length: 113
Instrument Model:
Seq Mode:

  Study Downloads

   Assemblies (5.9G  MD5: 77e6ae4c88de50f3e118f4efe15709ed)
   MAGs (1.8G  MD5: e02adadd9a8970481603fb4bfd983c5e)
   Genecalls (FNA) (6.4G  MD5: d96aeef20becd7a9acd77eaa8e6c114c)
   Proteins (FAA) (4.4G  MD5: 779f18032d6a78c970c044f1243b2be0)
   mOTUs3 Profile
   SPIRE mOTUs Profile

  Samples 168 samples

  Download Table Data

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