Verma_2021_FMT_rCDI

Identification and engraftment of new bacterial strains by shotgun metagenomic sequence analysis in patients with recurrent Clostridioides difficile infection before and after fecal microbiota transplantation and in healthy human subjects.
87
Samples
392
SPIRE Clusters
1,516
SPIRE Genomes
Accessions: PRJNA705895
intestine human host host-associated industrialized animal host mammalian host digestive tract
View in MetaMaps

  Sequencing

Total Sequencing (bp): 479,651,090,454
Average depth per sample (bp): 5,513,230,925
Average read length: 114
Instrument Model:
Seq Mode:

  Study Downloads

   Assemblies (3.7G  MD5: 1e06cb7f01a56dba04e73661bcbff50f)
   MAGs (1.7G  MD5: f9e242a3a9cab7b272526306ade3207d)
   Genecalls (FNA) (3.9G  MD5: 1b49caed5dbd9cb921ccf7bbbe64f143)
   Proteins (FAA) (2.7G  MD5: 454e99a365c5aeb3516605de4585b2ee)
   mOTUs3 Profile
   SPIRE mOTUs Profile

  Samples 87 samples

  Download Table Data

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