1,081,928
Genomes in SPIRE
host-associated 52,999
animal host 52,318
mammalian host 49,642
digestive tract 49,374
intestine 46,605
human host 44,106
industrialized 34,471
adult 19,189
aquatic 9,085
terrestrial 8,424
infant 8,346
urban 6,369
anthropogenic 5,507
marine 4,345
child 4,322
elderly 4,020
built environment 3,776
mouth 3,190
soil 3,125
rural 2,701
non-industrialized 2,534
fresh water 2,372
lentic 2,189
preterm birth 2,146
low salinity 2,114
skin 1,972
saliva 1,871
pelagic 1,702
high salinity 1,401
adolescent 1,290
full term birth 1,161
lacustrine 1,133
wastewater 1,047
benthic 938
wetland 800
paludal 766
lotic 726
forest 703
plant host 686
rumen 668
sludge 647
agriculture 611
traditional agriculturalist 582
medium salinity 571
brackish water 545
subsurface 532
very low temperature 487
groundwater 461
sediment 443
stream 420
airways 411
sewage 393
low temperature 391
hospital 390
urogenital tract 372
rhizosphere 371
fluvial 367
spring 358
hunter-gatherer 357
permafrost 356
saline water 349
grassland 315
contaminated 288
sea floor 276
estuary 269
very high temperature 247
insect host 242
cropland 236
hydrothermal vent 231
littoral 210
medium temperature 206
arid 203
phyllosphere 190
tundra 187
food 159
ancient microbiome 148
microaerobic 141
mine 136
ice 133
hot spring 127
fermented food 127
coral reef 113
very high salinity 108
alkaline 103
ancient dental calculus 97
acidic 92
air 83
anaerobic 83
lake bed 65
plant litter 65
dairy product 47
stream bed 43
mangrove 34
salt marsh 33
briny water 21
high temperature 17
negative control 12
waste 8
breast milk 1